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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015922526.1_cds_XP_016471277.1_63635
CDS Infomation

[gene=LOC107793438] [db_xref=GeneID:107793438] [protein=putative proline-rich receptor-like protein kinase PERK6 isoform X2] [protein_id=XP_016471277.1] [location=complement(join(8597..8809,9504..9665,9809..9950,10170..10246,10337..10407,10498..10584,11342..11899,12952..13426,13475..13681))] [gbkey=CDS]
Sequence

ATGTCTTCGTCATCATCTGAGGAATCTCCACCGTCAGATTCATCATCTTCAAATTCACCA
CCATCTTCCTCATCATCTCCACCAAATAATTCAAATTCTCAATCTCCTCATTCTGACAAT
AATTCATCATCTGGAAACAACAATAGCTCCTCTTCTTCCGGTGATAACAACAACAATAAT
AACAATAATAACAATAACAATAATAACTCAAACTCTCAATCTCCTCCCTCTAACAGTAAT
AACAATAATAATAATTCAAACTCTCAATCTCCTCCTTCTAACAATGACTCCTCGTCTGGA
AACGATAACAACAACAGTAATAACAACAATAACAATAATAATAATAATAACAATTCTGAT
AACAAGTCATCACCGGCTCCACCAAAATCACCGGATTCATCAAAAGGAGGTTCATCGGCT
CATTCACCGCCACCTCCGCCGCCGCCACCCTCTCCACCATCACATAATTCTCCTAACTCT
AGATCTCTTGCCCCTCCAAAGAATCCCTCGGCAAAGTCTGATGCTAAAGATAACAAAACA
TCACTCAGGGTTGGAGTTGCTGCTGGAGCAGGACTATTGTTTCTTGTTATGATAGTTTTC
CTCGTATCTTGTTGTAAACGAAAGAAGAAAAGGAAGCATGCTCAAATTGGCTACTACAGA
GACAATTCTCACGGAGTCATGAACAGTCGTCACTACTACAATAACAGTGGACAACATGGG
AACAATTGGCAGAATAATAACAAACTCCAATCAACAGATCAGTTTGGCAAAATGCCACCT
AGTGCACAAGTAAGTTCAGAACACAGTTGGCCAATCGCGCCGCCGCCGCCGCCACCAGTG
ATGAGTAGTAGTGAAATGAGTTCTGCAGCTTTCTCTGGTCCACATCAACCTCCTTTACCA
CCTCCACATCCAGCAATGGCTCTTGGTTTTAACCAAAGTAGTTTTACTTATGATGATTTA
GCAGCTGCAACTGGAGGATTTGCTAAGGCTAATCTTTTAGGACAAGGTGGTTTTGGTTAT
GTACATAAAGGAGTTTTGCCTAATGGTAAAGAGATTGCTGTTAAAAGTTTGAAATCTAAT
AGTGGACAAGGTGAAAGAGAGTTTCAAGCTGAGGTTGAAATTATAAGTCGTGTACATCAT
CGTCATCTCGTGTCTTTGGTTGGGTATTGTAGTGCTGGCTCTCAAAGGATGCTTGTTTAT
GAATTTGTTGCCAATAATACTCTTGAATATCACCTCCATGGAGCTGGTCGTCCACCTATG
GACTTCAATACAAGGCACAGAATTGCATTAGGATCTGCGAAAGGCTTTGCTTATCTTCAT
GAAGATTGCCACCCTAAAATTATTCATAGAGATATTAAAGCTGCAAATATCCTATTGGAC
GAAAATTTTGAAGCCAAGGTGGCTGATTTTGGGTTAGCTAAGCTTTCATCCGACACCAAT
ACTCATGTATCCACCCGTATCATGGGAACTTTTGGGTACTTAGCACCAGAGTATGCTTCA
AGTGGCAAACTAACTGAGAAATCTGATGTTTATTCATATGGAGTTATGCTTTTGGAACTT
ATAACTGGACGTCGTCCAATAGATATGGATGGTGACGATGATACCTTAGTTGAATGGGCA
AGGCCTATTCTCATTCGTGCAACAGAGGGTGGAGATTATGATGAACTAATAGATCCACGT
TTGGAGGGGAAATTTGATGCACAACAGATGTTATGTATGGTGGCATGTGCTGCTGCATCA
ATCAGGCATTCTGCTAAAAGACGTCCGAGAATGAGTCAGATTGTGCGTGCTTTAGAAGAT
GATGTTACTTTGGACGATTTAAATGAGGGAGGAAAACTTGGCCATAGTGCTACTCTTAGT
TCTGGTGGAAGTTCTGAACATGATGGAGGTTCATATGACATAAGAAAATTCAGAAAATCC
AGCATGTCAAGTCAAGAATACTCAAGCAGTGAAAATGGTGAATCTCGTGAATTTCGCCAA
AGCAAGAAGTGA

Peptide Sequence

PEP ID

XP_016471277.1
PEP Infomation

PREDICTED: putative proline-rich receptor-like protein kinase PERK6 isoform X2 [Nicotiana tabacum]
Sequence

MSSSSSEESPPSDSSSSNSPPSSSSSPPNNSNSQSPHSDNNSSSGNNNSSSSSGDNNNNN
NNNNNNNNNSNSQSPPSNSNNNNNNSNSQSPPSNNDSSSGNDNNNSNNNNNNNNNNNNSD
NKSSPAPPKSPDSSKGGSSAHSPPPPPPPPSPPSHNSPNSRSLAPPKNPSAKSDAKDNKT
SLRVGVAAGAGLLFLVMIVFLVSCCKRKKKRKHAQIGYYRDNSHGVMNSRHYYNNSGQHG
NNWQNNNKLQSTDQFGKMPPSAQVSSEHSWPIAPPPPPPVMSSSEMSSAAFSGPHQPPLP
PPHPAMALGFNQSSFTYDDLAAATGGFAKANLLGQGGFGYVHKGVLPNGKEIAVKSLKSN
SGQGEREFQAEVEIISRVHHRHLVSLVGYCSAGSQRMLVYEFVANNTLEYHLHGAGRPPM
DFNTRHRIALGSAKGFAYLHEDCHPKIIHRDIKAANILLDENFEAKVADFGLAKLSSDTN
THVSTRIMGTFGYLAPEYASSGKLTEKSDVYSYGVMLLELITGRRPIDMDGDDDTLVEWA
RPILIRATEGGDYDELIDPRLEGKFDAQQMLCMVACAAASIRHSAKRRPRMSQIVRALED
DVTLDDLNEGGKLGHSATLSSGGSSEHDGGSYDIRKFRKSSMSSQEYSSSENGESREFRQ
SKK

Transcript Sequence

Gene sequence data has not been registered.